View Issue Details
| ID | Project | Category | View Status | Date Submitted | Last Update |
|---|---|---|---|---|---|
| 0001359 | channel: kernel/el9 | kernel-ml | public | 2023-06-27 06:16 | 2023-06-28 18:22 |
| Reporter | stPro | Assigned To | toracat | ||
| Priority | normal | Severity | minor | Reproducibility | always |
| Status | closed | Resolution | no change required | ||
| Platform | Linux | OS | AlmaLinux | OS Version | 9.2 |
| Summary | 0001359: kernel-ml-headers should provide "kernel-headers" | ||||
| Description | With kernel-ml on AlmaLinux 9.2 updating the glibc fails because of its "kernel-headers" dependency. As kernel-ml-headers and kernel-headers have common files installing both packages will fail. ~ rpm -q almalinux-release almalinux-release-9.2-1.el9.x86_64 ~ dnf list updates Last metadata expiration check: 2:00:16 ago on Tue Jun 27 11:12:28 2023. Available Upgrades glibc.x86_64 2.34-60.el9 baseos glibc-common.x86_64 2.34-60.el9 baseos glibc-devel.x86_64 2.34-60.el9 appstreamglibc-gconv-extra.x86_64 2.34-60.el9 baseos glibc-headers.x86_64 2.34-60.el9 appstreamglibc-langpack-ru.x86_64 2.34-60.el9 baseos glibc-minimal-langpack.x86_64 2.34-60.el9 baseos grub2-common.noarch 1:2.06-61.el9.alma baseos grub2-efi-x64.x86_64 1:2.06-61.el9.alma baseos grub2-tools.x86_64 1:2.06-61.el9.alma baseos grub2-tools-efi.x86_64 1:2.06-61.el9.alma baseos grub2-tools-extra.x86_64 1:2.06-61.el9.alma baseos grub2-tools-minimal.x86_64 1:2.06-61.el9.alma baseos shim-x64.x86_64 15.6-1.el9.alma.1 baseos ~ rpm -qa kernel\* | sort kernel-ml-6.4.0-1.el9.elrepo.x86_64 kernel-ml-core-6.4.0-1.el9.elrepo.x86_64 kernel-ml-devel-6.4.0-1.el9.elrepo.x86_64 kernel-ml-headers-6.4.0-1.el9.elrepo.x86_64 kernel-ml-modules-6.4.0-1.el9.elrepo.x86_64 kernel-ml-tools-6.4.0-1.el9.elrepo.x86_64 kernel-ml-tools-libs-6.4.0-1.el9.elrepo.x86_64 kernel-srpm-macros-1.0-12.el9.noarch ~ dnf repoquery glibc-headers --requires Last metadata expiration check: 2:02:10 ago on Tue Jun 27 11:12:28 2023. glibc = 2.34-60.el9 ~ dnf upgrade Last metadata expiration check: 2:02:26 ago on Tue Jun 27 11:12:28 2023. Dependencies resolved. =========================================================================================================================================================================== Package Architecture Version Repository Size ===========================================================================================================================================================================Upgrading: glibc x86_64 2.34-60.el9 baseos 1.9 M glibc-common x86_64 2.34-60.el9 baseos 308 k glibc-devel x86_64 2.34-60.el9 appstream 48 k glibc-gconv-extra x86_64 2.34-60.el9 baseos 1.6 M glibc-headers x86_64 2.34-60.el9 appstream 448 k glibc-langpack-ru x86_64 2.34-60.el9 baseos 537 k glibc-minimal-langpack x86_64 2.34-60.el9 baseos 35 k grub2-common noarch 1:2.06-61.el9.alma baseos 905 k grub2-efi-x64 x86_64 1:2.06-61.el9.alma baseos 1.3 M grub2-tools x86_64 1:2.06-61.el9.alma baseos 1.8 M grub2-tools-efi x86_64 1:2.06-61.el9.alma baseos 540 k grub2-tools-extra x86_64 1:2.06-61.el9.alma baseos 839 k grub2-tools-minimal x86_64 1:2.06-61.el9.alma baseos 603 k shim-x64 x86_64 15.6-1.el9.alma.1 baseos 678 k Installing dependencies: kernel x86_64 5.14.0-284.11.1.el9_2 baseos 3.4 M kernel-core x86_64 5.14.0-284.11.1.el9_2 baseos 17 M kernel-headers x86_64 5.14.0-284.11.1.el9_2 appstream 4.8 M kernel-modules x86_64 5.14.0-284.11.1.el9_2 baseos 37 M kernel-modules-core x86_64 5.14.0-284.11.1.el9_2 baseos 35 M Transaction Summary ===========================================================================================================================================================================Install 5 Packages Upgrade 14 Packages Total size: 109 M Is this ok [y/N]: y Downloading Packages: [SKIPPED] kernel-headers-5.14.0-284.11.1.el9_2.x86_64.rpm: Already downloaded [SKIPPED] kernel-5.14.0-284.11.1.el9_2.x86_64.rpm: Already downloaded [SKIPPED] kernel-core-5.14.0-284.11.1.el9_2.x86_64.rpm: Already downloaded [SKIPPED] kernel-modules-5.14.0-284.11.1.el9_2.x86_64.rpm: Already downloaded [SKIPPED] kernel-modules-core-5.14.0-284.11.1.el9_2.x86_64.rpm: Already downloaded [SKIPPED] glibc-devel-2.34-60.el9.x86_64.rpm: Already downloaded [SKIPPED] glibc-headers-2.34-60.el9.x86_64.rpm: Already downloaded [SKIPPED] glibc-2.34-60.el9.x86_64.rpm: Already downloaded [SKIPPED] glibc-common-2.34-60.el9.x86_64.rpm: Already downloaded [SKIPPED] glibc-gconv-extra-2.34-60.el9.x86_64.rpm: Already downloaded [SKIPPED] glibc-langpack-ru-2.34-60.el9.x86_64.rpm: Already downloaded [SKIPPED] glibc-minimal-langpack-2.34-60.el9.x86_64.rpm: Already downloaded [SKIPPED] grub2-common-2.06-61.el9.alma.noarch.rpm: Already downloaded [SKIPPED] grub2-efi-x64-2.06-61.el9.alma.x86_64.rpm: Already downloaded [SKIPPED] grub2-tools-2.06-61.el9.alma.x86_64.rpm: Already downloaded [SKIPPED] grub2-tools-efi-2.06-61.el9.alma.x86_64.rpm: Already downloaded [SKIPPED] grub2-tools-extra-2.06-61.el9.alma.x86_64.rpm: Already downloaded [SKIPPED] grub2-tools-minimal-2.06-61.el9.alma.x86_64.rpm: Already downloaded [SKIPPED] shim-x64-15.6-1.el9.alma.1.x86_64.rpm: Already downloaded Running transaction check Transaction check succeeded. Running transaction test The downloaded packages were saved in cache until the next successful transaction. You can remove cached packages by executing 'dnf clean packages'. Error: Transaction test error: file /usr/include/asm-generic/fcntl.h from install of kernel-headers-5.14.0-284.11.1.el9_2.x86_64 conflicts with file from package kernel-ml-headers-6.4.0-1.el9.elrepo.x86_64 file /usr/include/asm-generic/hugetlb_encode.h from install of kernel-headers-5.14.0-284.11.1.el9_2.x86_64 conflicts with file from package kernel-ml-headers-6.4.0-1.el9.elrepo.x86_64 | ||||
| Tags | No tags attached. | ||||
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Please see the guidance here: https://elrepo.org/tiki/kernel-ml [quote] There is no need to install the kernel-ml-headers package. It is only necessary if you intend to rebuild glibc and, thus, the entire operating system. If there is a need to have the kernel headers installed, you should use the current distributed kernel-headers package as that is related to the current version of glibc. [/quote] Does that resolve your query? |
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Yes, but not completely. Now grub2 and shim-x64 require the installation of a kernel-core. |
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Are you trying to install kernel-ml and remove all instances of the distro kernel? Would it hurt to keep one instance of the distro kernel on the system (thus providing kernel-core)? We can certainly check if kernel-ml-core should maybe also be meeting the provide for kernel-core, but the kernel-ml package set is generally configured to be installed alongside the distro kernel (hence the revised kernel-ml package name) as an alternative option to the distro kernel, not as a replacement for it. Thanks |
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~ dnf remove kernel-core Dependencies resolved. =========================================================================================================================================================================== Package Architecture Version Repository Size =========================================================================================================================================================================== Removing: kernel-core x86_64 4.18.0-477.13.1.el8_8 @baseos 70 M Removing dependent packages: grub2-efi-x64 x86_64 1:2.02-148.el8.alma @baseos 2.1 M shim-x64 x86_64 15.6-1.el8.alma.1 @baseos 3.6 M Removing unused dependencies: efi-filesystem noarch 3-3.el8 @baseos 0 Transaction Summary =========================================================================================================================================================================== Remove 4 Packages Okay, I get the idea. Thanks for the help. I will leave the kernel-core of the distribution. I hope this doesn't create problems. Thanks! |
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Previously, the installation of the distribution kernel-core was not required, but after the release of 9.2 and 8.8, this changed, so I decided to report it. |
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Acknowledged. It sounds like some dependencies changed in the latest releases. We do not have either of those two packages installed on our el8|9 systems. Can you determine what in those two packages is required from kernel-core. If it's deps that can be met by kernel-ml-core, we can consider adding the provides. |
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➜ ~ repoquery --requires --resolve shim-x64 Last metadata expiration check: 0:06:21 ago on Tue 27 Jun 2023 11:36:37 PM MSK. dbxtool-0:8-5.el8_3.2.x86_64 efi-filesystem-0:3-3.el8.noarch fwupd-0:1.7.8-1.el8.alma.1.x86_64 grub2-efi-ia32-1:2.02-148.el8.alma.x86_64 grub2-efi-x64-1:2.02-148.el8.alma.x86_64 kernel-core-0:4.18.0-477.13.1.el8_8.x86_64 mokutil-1:0.3.0-12.el8.x86_64 ➜ ~ repoquery --requires --resolve grub2-efi-x64 Last metadata expiration check: 0:06:35 ago on Tue 27 Jun 2023 11:36:37 PM MSK. bash-0:4.4.20-4.el8_6.x86_64 efi-filesystem-0:3-3.el8.noarch grub2-common-1:2.02-148.el8.alma.noarch grub2-tools-1:2.02-148.el8.alma.x86_64 grub2-tools-extra-1:2.02-148.el8.alma.x86_64 grub2-tools-minimal-1:2.02-148.el8.alma.x86_64 shim-x64-0:15.6-1.el8.alma.1.x86_64 ➜ ~ repoquery --requires --resolve glibc-devel Last metadata expiration check: 0:06:54 ago on Tue 27 Jun 2023 11:36:37 PM MSK. bash-0:4.4.20-4.el8_6.x86_64 glibc-0:2.28-225.el8.i686 glibc-0:2.28-225.el8.x86_64 glibc-headers-0:2.28-225.el8.i686 glibc-headers-0:2.28-225.el8.x86_64 info-0:6.5-7.el8.x86_64 libgcc-0:8.5.0-18.el8.alma.i686 libgcc-0:8.5.0-18.el8.alma.x86_64 libxcrypt-devel-0:4.1.1-6.el8.i686 libxcrypt-devel-0:4.1.1-6.el8.x86_64 ➜ ~ repoquery --requires --resolve glibc-headers Last metadata expiration check: 0:07:04 ago on Tue 27 Jun 2023 11:36:37 PM MSK. bash-0:4.4.20-4.el8_6.x86_64 glibc-0:2.28-225.el8.i686 glibc-0:2.28-225.el8.x86_64 kernel-headers-0:4.18.0-477.13.1.el8_8.x86_64 kernel-lt-headers-0:5.4.248-1.el8.elrepo.x86_64 kernel-ml-headers-0:6.4.0-1.el8.elrepo.x86_64 |
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For 9.2 release: ➜ ~ repoquery --requires --resolve shim-x64 Last metadata expiration check: 4:27:37 ago on Tue Jun 27 19:17:56 2023. efi-filesystem-0:6-2.el9_0.0.1.noarch fwupd-0:1.8.10-2.el9.alma.x86_64 grub2-efi-x64-1:2.06-61.el9.alma.x86_64 kernel-0:5.14.0-284.11.1.el9_2.x86_64 mokutil-2:0.6.0-4.el9.x86_64 |
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~ yum deplist shim-x64 Last metadata expiration check: 0:16:03 ago on Tue 27 Jun 2023 11:36:37 PM MSK. package: shim-x64-15.6-1.el8.alma.1.x86_64 dependency: /boot/efi/EFI/almalinux/grubx64.efi provider: grub2-efi-x64-1:2.02-148.el8.alma.x86_64 dependency: almalinux(grub2-sig-key) >= 202303 provider: grub2-efi-ia32-1:2.02-148.el8.alma.x86_64 provider: grub2-efi-x64-1:2.02-148.el8.alma.x86_64 dependency: almalinux(kernel-sig-key) >= 202303 provider: kernel-core-4.18.0-477.13.1.el8_8.x86_64 dependency: dbxtool >= 0.6-3 provider: dbxtool-8-5.el8_3.2.x86_64 provider: fwupd-1.7.8-1.el8.alma.1.x86_64 dependency: efi-filesystem provider: efi-filesystem-3-3.el8.noarch dependency: mokutil >= 1:0.3.0-1 provider: mokutil-1:0.3.0-12.el8.x86_64 |
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It looks like I cannot reproduce the reported result with RHEL-9. On a RHEL-9 system: < No kernel-ml installed on the system > $ sudo repoquery --requires --resolve shim-x64 efi-filesystem-0:6-2.el9_0.noarch fwupd-0:1.8.10-2.el9.x86_64 mokutil-2:0.6.0-4.el9.x86_64 < kernel-ml-6.4.0-1.el9.elrepo now installed > $ sudo repoquery --requires --resolve shim-x64 efi-filesystem-0:6-2.el9_0.noarch fwupd-0:1.8.10-2.el9.x86_64 mokutil-2:0.6.0-4.el9.x86_64 On an AlmaLinux-9 system: < kernel-ml-6.4.0-1.el9.elrepo installed > $ sudo repoquery --requires --resolve shim-x64 efi-filesystem-0:6-2.el9_0.0.1.noarch fwupd-0:1.8.10-2.el9.alma.x86_64 grub2-efi-x64-1:2.06-61.el9.alma.x86_64 <===== Only in Alma kernel-0:5.14.0-284.11.1.el9_2.x86_64 <===== Only in Alma mokutil-2:0.6.0-4.el9.x86_64 |
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It seems that the problem is exclusively for AlmaLinux: dependency: almalinux(kernel-sig-key) >= 202303 provider: kernel-core-4.18.0-477.13.1.el8_8.x86_64 |
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I'm closing this as 'not a bug'. Feel free to reopen if you have comments to add. |
| Date Modified | Username | Field | Change |
|---|---|---|---|
| 2023-06-27 06:16 | stPro | New Issue | |
| 2023-06-27 06:16 | stPro | Status | new => assigned |
| 2023-06-27 06:16 | stPro | Assigned To | => pperry |
| 2023-06-27 08:17 | pperry | Project | channel: elrepo/el9 => channel: kernel/el9 |
| 2023-06-27 08:17 | pperry | Category | elrepo-release => General |
| 2023-06-27 08:17 | pperry | Assigned To | pperry => toracat |
| 2023-06-27 08:17 | pperry | Category | General => kernel-ml |
| 2023-06-27 08:25 | pperry | Note Added: 0009226 | |
| 2023-06-27 08:31 | stPro | Note Added: 0009227 | |
| 2023-06-27 08:40 | pperry | Note Added: 0009230 | |
| 2023-06-27 08:41 | pperry | Note Edited: 0009230 | |
| 2023-06-27 08:43 | stPro | Note Added: 0009231 | |
| 2023-06-27 08:46 | stPro | Note Added: 0009232 | |
| 2023-06-27 09:30 | pperry | Note Added: 0009233 | |
| 2023-06-27 16:44 | stPro | Note Added: 0009235 | |
| 2023-06-27 16:45 | stPro | Note Added: 0009236 | |
| 2023-06-27 16:53 | stPro | Note Added: 0009237 | |
| 2023-06-27 18:15 | toracat | Note Added: 0009238 | |
| 2023-06-28 05:13 | stPro | Note Added: 0009239 | |
| 2023-06-28 18:22 | toracat | Note Added: 0009240 | |
| 2023-06-28 18:22 | toracat | Status | assigned => closed |
| 2023-06-28 18:22 | toracat | Resolution | open => no change required |
